标题: mpirun noticed that process rank 0 with PID 0 on node localhost exited on sig... [打印本页] 作者Author: yuhaili 时间: 2023-5-10 23:03 标题: mpirun noticed that process rank 0 with PID 0 on node localhost exited on sig...
报错
[file orca_scf/scfguess.cpp, line 4866, Process 0]:
Error encountered when trying to calculate the atomic fitting density!
[localhost:44945] *** Process received signal ***
[localhost:44945] Signal: Aborted (6)
[localhost:44945] Signal code: (-6)
[localhost:44945] [ 0] /lib64/libc.so.6(+0x36400)[0x7efe43a78400]
[localhost:44945] [ 1] /lib64/libc.so.6(gsignal+0x37)[0x7efe43a78387]
[localhost:44945] [ 2] /lib64/libc.so.6(abort+0x148)[0x7efe43a79a78]
[localhost:44945] [ 3] /root/orca503/liborca_tools_5_0_3_mpi.so.5(+0x721bbd)[0x7efe45069bbd]
[localhost:44945] [ 4] /root/orca503/orca_scf_mpi[0x4a165f]
[localhost:44945] [ 5] /root/orca503/orca_scf_mpi[0x425a1b]
[localhost:44945] [ 6] /root/orca503/orca_scf_mpi[0x432885]
[localhost:44945] [ 7] /root/orca503/orca_scf_mpi[0x433134]
[localhost:44945] [ 8] /lib64/libc.so.6(__libc_start_main+0xf5)[0x7efe43a64555]
[localhost:44945] [ 9] /root/orca503/orca_scf_mpi[0x425252]
[localhost:44945] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 0 on node localhost exited on signal 6 (Aborted).
--------------------------------------------------------------------------
[file orca_tools/qcmsg.cpp, line 465]:
.... aborting the run
配置 [root@localhost yuhl]# which mpirun
alias mpirun='mpirun -x LD_PRELOAD=libmpi.so'
/root/openmpi411/bin/mpirun
[root@localhost yuhl]# which gfortran
/usr/bin/gfortran
[root@localhost yuhl]# gfortran --version
GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-44)
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
[root@localhost yuhl]# which orca
alias orca='/root/orca503/orca'
/root/orca503/orca