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Cylview transition state visualization

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发布时间: 2019-11-29 18:13

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本帖最后由 aitouna 于 2019-11-29 19:28 编辑 Hello everybody, I used the software Cylview for the visualization of some Transition states, and i know how to set the bonds distansce intermoleculair ...

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sobereva 发表于 Post on 2019-12-1 02:18:01
aitouna 发表于 2019-11-30 17:05
Dear Sobereva, Dear Daniel_Arndt,
Thank you all very very much. I would like to ask if there is a  ...

Consider VMD and SAMSON, both of them are free and can give very nice graph. However, they are not able to directly load output file of any quantum chemistry code.
zsu007 发表于 Post on 2019-11-30 18:57:57
See the Cylview  Help!
aitouna 发表于 Post on 2019-11-30 17:05:09
Dear Sobereva, Dear Daniel_Arndt,
Thank you all very very much. I would like to ask if there is a good alternative to Cylview give good figures for publication.


Sincerely,
Daniel_Arndt 发表于 Post on 2019-11-30 01:00:58
Actually based on my experience it is more convenient to add the values of bond distances manually by MSPaint or PowerPoint, especially for figures in papers to be published.
sobereva 发表于 Post on 2019-11-30 00:38:17
aitouna 发表于 2019-11-29 22:11
Dear All,
I don't think they used MsPaint or another tools you mentioned, just Cylview but i don't  ...

CYLview itself cannot label two values, you have to use third-part softwares such as photoshop, powerpoint, etc.
aitouna 发表于 Post on 2019-11-29 22:11:06
Dear All,
I don't think they used MsPaint or another tools you mentioned, just Cylview but i don't know how ?
liyuanhe211 发表于 Post on 2019-11-29 21:43:26

杀鸡焉用牛刀
我本是个娃娃 发表于 Post on 2019-11-29 21:03:15
liyuanhe211 发表于 2019-11-29 20:07
It seems to me that the numbers in the screenshot are all added in post-processing using MSPaint, Po ...

why not PS?

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liyuanhe211 发表于 Post on 2019-11-29 20:07:25
It seems to me that the numbers in the screenshot are all added in post-processing using MSPaint, PowerPoint, etc.

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