在用Amber-gaussian 连用计算网上一个QM-MM练习时,发现计算似乎正常结束了,但是好像不能存档,而且命令行无法停止,请教个位牛人,非常感谢!
采用 tail -f gau_job.log或者强制中断后可以看到:
。。。。。。。。。。。。。。。
Test job not archived.
1\1\ WCSS.PL-BEM-BOGON\Force\RBLYP\6-31G\C4H6N2\XZHFOOD\12-Jul-2020\0\
\#P BLYP/6-31G SCF=(Conver=8) NoSymm Force Guess=Read Charge Prop=(Fie
ld,Read)\\Gaussian run using SANDER external interface.\\0,1\C,5.66390
97822,4.2211574142,-1.2341408983\H,5.808441835,3.1404117105,-1.2421449
884\H,5.1216584037,4.5210309915,-2.1321495025\C,7.0336041257,4.8397232
263,-1.3235787552\N,7.888402001,4.5812967348,-2.3889786051\C,9.0069913
125,5.2628267153,-2.1927140303\H,9.8201122211,5.2081988944,-2.90322094
79\N,8.9100917958,5.9456751684,-1.0575859111\H,9.613615488,6.541327479
1,-0.6757053\C,7.7574590433,5.6565287069,-0.5085799062\H,7.5498262414,
6.1421905218,0.517317355\H,5.0866142501,4.5020436055,-0.3532704106\\Ve
rsion=ES64L-G09RevE.01\HF=-265.8839109\RMSD=3.395e-09\RMSF=3.056e-02\D
ipole=0.7439314,0.5264028,0.5612516\Quadrupole=15.6967976,-0.1361551,-
15.5606425,18.887018,6.612516,3.9878499\PG=C01 [X(C4H6N2)]\\@
AMBER 控制文件如下:
Example QM/MM input for Sander-12 - Gaussian interface
&cntrl
imin=1, maxcyc=1000,
ntb=0,
cut=20.0,
ifqnt=1,
&end
&qmmm
qmmask='@11-21',
qmcharge=0,
spin=1,
qm_theory='EXTERN',
qmcut=20.0
&end
&gau
executable = g09,
method = 'BLYP',
basis = '6-31G',
num_threads = 36,
mem = '50GB'
&end
THE REAL VOYAGE OF DISCOVERY CONSISTS NOT IN SEEKING NEW LANDSCAPES
BUT IN HAVING NEW EYES.
-- MARCEL PROUST
Job cpu time: 0 days 0 hours 1 minutes 11.7 seconds.
File lengths (MBytes): RWF= 5 Int= 0 D2E= 0 Chk= 1 Scr= 1
Normal termination of Gaussian 09 at Sun Jul 12 00:11:14 2020.
|