本帖最后由 youguojian 于 2015-3-23 22:56 编辑
我做的是模拟精细光谱(荧光激发光谱或发射光谱),只考虑基态S0到第一激发单重态S1态的跃迁!用模拟出的精细光谱与实验光谱进行对比来探讨FC、HT对光谱的影响!
在做光谱图的时候采用FCclasses的程序,有一个el文件,里面主要是电子跃迁偶极矩。
el文件中共有3N+2行数据,以吸收为例,
第一行是td-s0的电子跃迁偶极矩,如下图蓝色部分
Excited states from <AA,BB:AA,BB> singles matrix:
************************************************
1PDM for each excited state written to RWF 633
Ground to excited state transition densities written to RWF 633
Ground to excited state transition electric dipole moments (Au):
state X Y Z Dip. S. Osc.
1 -2.4391 -1.9020 0.0000 9.5670 0.9016
2 0.4099 0.3393 0.0000 0.2832 0.0310
3 0.0000 0.0000 0.0000 0.0000 0.0000
4 0.0000 0.0000 0.0000 0.0000 0.0000
5 0.0000 0.0000 0.1144 0.0131 0.0016
第二行是td-s1的电子跃迁偶极矩,如下图蓝色部分
Excited states from <AA,BB:AA,BB> singles matrix:
*************************************************
1PDM for each excited state written to RWF 633
Ground to excited state transition densities written to RWF 633
Ground to excited state transition electric dipole moments (Au):
state X Y Z Dip. S. Osc.
1 -2.5823 -2.1369 0.0000 11.2344 0.9083
2 0.3638 0.3271 0.0000 0.2394 0.0245
3 0.0000 0.0000 0.0000 0.0000 0.0000
4 0.0000 0.0000 0.0000 0.0000 0.0000
5 0.0000 0.0000 0.1027 0.0105 0.0012
第三行到3N+2行是从S1态的频率中取出的,如下图蓝色部分
【s1态频率计算输入为 #p td(singlets,nstates=5,root=1) b3lyp/6-311++G** freq(noraman,hpmode) scf=(maxcyc=400,conver=8) iop(2/16=2,2/17=2)】
Test job not archived.
1\1\GINC-WORK215\Freq\RB3LYP TD-FC\6-311++G(d,p)\C14H12\DYUL\22-Nov-20
14\0\\#p td(singlets,nstates=5,root=1) b3lyp/6-311++G** freq(noraman,h
pmode) scf=(maxcyc=400,conver=8) iop(2/16=2,2/17=2)\\transstilbene-b3l
yp-s1-freq\\0,1\C,2.459146,3.564997,0.\C,1.285189,2.844564,0.\C,1.2851
89,1.413884,0.\C,2.568238,0.758542,0.\C,3.737419,1.4991,0.\C,3.703384,
2.897989,0.\C,0.062079,0.704662,0.\C,-0.062079,-0.704662,0.\C,-1.28518
9,-1.413884,0.\C,-2.568238,-0.758542,0.\C,-3.737419,-1.4991,0.\C,-3.70
3384,-2.897989,0.\C,-2.459146,-3.564997,0.\C,-1.285189,-2.844564,0.\H,
2.428936,4.648799,0.\H,0.330615,3.361326,0.\H,2.621403,-0.322615,0.\H,
4.694096,0.987592,0.\H,4.6262,3.466498,0.\H,-0.842029,1.303612,0.\H,0.
842029,-1.303612,0.\H,-2.621403,0.322615,0.\H,-4.694096,-0.987592,0.\H
,-4.6262,-3.466498,0.\H,-2.428936,-4.648799,0.\H,-0.330615,-3.361326,0
.\\Version=EM64L-G09RevB.01\State=1-AG\HF=-540.8368829\RMSD=3.696e-09\
RMSF=1.127e-04\ZeroPoint=0.2105286\Thermal=0.2222033\Dipole=0.,0.,0.\D
ipoleDeriv=0.0388706,0.0052033,0.,-0.3761467,-0.0651499,0.,0.,0.,-0.13
78307,0.1182335,0.0019714,0.,0.4246514,0.3624711,0.,0.,0.,-0.1216611,0
.5769346,0.3177105,0.,-0.5229937,-0.4616759,0.,0.,0.,0.0211499,-0.0401
107,0.0657547,0.,0.6281293,0.277755,0.,0.,0.,-0.1569223,0.1538877,0.00
85735,0.,-0.4701318,-0.2413235,0.,0.,0.,-0.1377625,-0.3674837,-0.27713
44,0.,0.2190851,0.0423055,0.,0.,0.,-0.1492209,-0.4511808,-0.2727125,0.
,0.0851218,0.2343145,0.,0.,0.,-0.134085,-0.4511808,-0.2727125,0.,0.085
1218,0.2343145,0.,0.,0.,-0.134085,0.5769346,0.3177105,0.,-0.5229937,-0
.4616759,0.,0.,0.,0.0211499,-0.0401107,0.0657547,0.,0.6281293,0.277755
,0.,0.,0.,-0.1569223,0.1538877,0.0085735,0.,-0.4701318,-0.2413235,0.,0
.,0.,-0.1377625,-0.3674837,-0.2771344,0.,0.2190851,0.0423055,0.,0.,0.,
-0.1492209,0.0388706,0.0052033,0.,-0.3761467,-0.0651499,0.,0.,0.,-0.13
78307,0.1182335,0.0019714,0.,0.4246514,0.3624711,0.,0.,0.,-0.1216611,0
.0920995,0.0243539,0.,-0.0261776,-0.1302514,0.,0.,0.,0.1400157,-0.0033
722,0.1215136,0.,-0.0212932,-0.0063964,0.,0.,0.,0.1209528,0.0467449,-0
.0290494,0.,0.0489353,-0.0480519,0.,0.,0.,0.1452827,-0.1139714,0.02733
07,0.,0.103259,0.052782,0.,0.,0.,0.1313721,-0.0722643,-0.0876494,0.,-0
.072075,0.024176,0.,0.,0.,0.1550237,0.0209709,0.0953811,0.,-0.0202088,
-0.0396816,0.,0.,0.,0.1237607,0.0209709,0.0953811,0.,-0.0202088,-0.039
6816,0.,0.,0.,0.1237607,0.0467449,-0.0290494,0.,0.0489353,-0.0480519,0
.,0.,0.,0.1452827,-0.1139714,0.0273307,0.,0.103259,0.052782,0.,0.,0.,0
.1313721,-0.0722643,-0.0876494,0.,-0.072075,0.024176,0.,0.,0.,0.155023
7,0.0920995,0.0243539,0.,-0.0261776,-0.1302514,0.,0.,0.,0.1400157,-0.0
033722,0.1215136,0.,-0.0212932,-0.0063964,0.,0.,0.,0.1209528\Quadrupol
e=4.4487729,5.0429737,-9.4917467,0.6065116,0.,0.\QuadrupoleDeriv=-0.22
8216,-0.0988853,0.3271012,-0.8645728,0.0000001,0.,-1.9971109,2.9736919
,-0.976581,0.2386771,-0.0000002,0.0000001,0.,0.,0.,0.,-0.6535928,-1.25
81428,-0.4866973,0.2684998,0.2181975,2.1141145,0.,-0.0000001,0.7663764
,-0.7814672,0.0150909,-0.9718895,0.,0.,0.,0.,0.,0.,-0.1566667,-0.88986
15,-0.1434811,0.3556703,-0.2121893,-0.927754,0.,0.,-0.6070708,0.759942
3,-0.1528714,0.0576572,0.,0.,0.,0.,0.,0.,0.3894226,-0.0663626,-0.77977
42,-0.1707761,0.9505503,-0.7456699,0.,-0.0000002,1.482348,-2.1222509,0
.6399028,-0.0600372,0.,-0.0000001,0.,0.,0.,0.,-0.9221898,0.3302635,1.9
问题: 以上是我做el文件的步骤,我想问的是我在第三步的时候所选择的的蓝色部分是不是电子跃迁偶极矩,与el文件第一行与第二行的跃迁偶极矩是不是一回事!
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